STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN01791.1Acetylornithine deacetylase succinyl-diaminopimelate desuccinylase-like protein. (458 aa)    
Predicted Functional Partners:
KRN03083.1
Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family.
     
 0.592
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 
 0.584
KRN03019.1
Dipeptidyl aminopeptidase acylaminoacyl-peptidase.
 
     0.535
KRN01792.1
ECF-type sigma factor negative effector.
       0.482
KRN03183.1
Membrane alanyl aminopeptidase.
    
 0.479
KRN02400.1
Exonuclease III.
      0.471
KRN01790.1
Signal peptidase I; Belongs to the peptidase S26 family.
       0.428
KRN01638.1
Dipeptidyl aminopeptidase acylaminoacyl-peptidase.
 
     0.423
KRN02682.1
Imidazolonepropionase related amidohydrolase.
 
     0.413
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.