Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN01582.1 | KRN01584.1 | FD13_GL000724 | FD13_GL000726 | Metal-binding protein. | SAM-dependent methyltransferase. | 0.690 |
KRN01582.1 | KRN01586.1 | FD13_GL000724 | FD13_GL000728 | Metal-binding protein. | HD superfamily NAD metabolism hydrolase. | 0.702 |
KRN01582.1 | KRN01588.1 | FD13_GL000724 | FD13_GL000730 | Metal-binding protein. | Hypothetical protein. | 0.687 |
KRN01582.1 | KRN01589.1 | FD13_GL000724 | FD13_GL000731 | Metal-binding protein. | GTP-binding protein YqeH. | 0.753 |
KRN01582.1 | KRN01590.1 | FD13_GL000724 | FD13_GL000732 | Metal-binding protein. | HAD superfamily hydrolase. | 0.589 |
KRN01582.1 | nadD | FD13_GL000724 | FD13_GL000729 | Metal-binding protein. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.695 |
KRN01582.1 | rsfS | FD13_GL000724 | FD13_GL000727 | Metal-binding protein. | Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.699 |
KRN01582.1 | tmcAL | FD13_GL000724 | FD13_GL000725 | Metal-binding protein. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.694 |
KRN01584.1 | KRN01582.1 | FD13_GL000726 | FD13_GL000724 | SAM-dependent methyltransferase. | Metal-binding protein. | 0.690 |
KRN01584.1 | KRN01586.1 | FD13_GL000726 | FD13_GL000728 | SAM-dependent methyltransferase. | HD superfamily NAD metabolism hydrolase. | 0.838 |
KRN01584.1 | KRN01588.1 | FD13_GL000726 | FD13_GL000730 | SAM-dependent methyltransferase. | Hypothetical protein. | 0.838 |
KRN01584.1 | KRN01589.1 | FD13_GL000726 | FD13_GL000731 | SAM-dependent methyltransferase. | GTP-binding protein YqeH. | 0.682 |
KRN01584.1 | KRN01590.1 | FD13_GL000726 | FD13_GL000732 | SAM-dependent methyltransferase. | HAD superfamily hydrolase. | 0.676 |
KRN01584.1 | KRN02215.1 | FD13_GL000726 | FD13_GL002088 | SAM-dependent methyltransferase. | Glycine D-amino acid oxidase. | 0.651 |
KRN01584.1 | glyA | FD13_GL000726 | FD13_GL000595 | SAM-dependent methyltransferase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.756 |
KRN01584.1 | nadD | FD13_GL000726 | FD13_GL000729 | SAM-dependent methyltransferase. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.828 |
KRN01584.1 | rsfS | FD13_GL000726 | FD13_GL000727 | SAM-dependent methyltransferase. | Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.837 |
KRN01584.1 | tmcAL | FD13_GL000726 | FD13_GL000725 | SAM-dependent methyltransferase. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.918 |
KRN01586.1 | KRN01582.1 | FD13_GL000728 | FD13_GL000724 | HD superfamily NAD metabolism hydrolase. | Metal-binding protein. | 0.702 |
KRN01586.1 | KRN01584.1 | FD13_GL000728 | FD13_GL000726 | HD superfamily NAD metabolism hydrolase. | SAM-dependent methyltransferase. | 0.838 |
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