STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN01486.1Diguanylate cyclase phosphodiesterase domain-containing protein. (376 aa)    
Predicted Functional Partners:
KRN01655.1
C-di-GMP-specific phosphodiesterase.
 
 0.892
KRN01779.1
C-di-GMP-specific phosphodiesterase.
 
 0.886
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.802
KRN01525.1
Hypothetical protein.
  
     0.615
KRN02074.1
Family 2 glycosyl transferase.
 
 
 0.612
KRN01487.1
Esterase lipase.
       0.608
KRN02120.1
Crp-like transcriptional regulator.
    
 0.547
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.542
KRN02377.1
Hypothetical protein.
  
     0.517
KRN03057.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.