STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN01404.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
KRN01405.1
Hypothetical protein.
 
    0.833
KRN03167.1
Hypothetical protein.
  
     0.774
KRN03326.1
Hypothetical protein.
  
     0.772
KRN01993.1
Hypothetical protein.
  
     0.769
KRN01994.1
Hypothetical protein.
  
     0.768
KRN02968.1
Hypothetical protein.
  
     0.766
KRN02904.1
Lipoprotein.
  
     0.764
KRN01848.1
Hypothetical protein.
  
     0.762
KRN02988.1
Hypothetical protein.
  
     0.754
KRN02797.1
Hypothetical protein.
  
     0.743
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.