STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN02814.1DNA uptake protein related DNA-binding protein. (160 aa)    
Predicted Functional Partners:
KRN02811.1
Metallo-beta-lactamase superfamily hydrolase.
 
  
 0.899
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.893
KRN02815.1
Lon-like protease.
      0.858
KRN02812.1
Deoxycytidylate deaminase.
  
    0.809
KRN02455.1
Superfamily II DNA RNA helicase.
   
  
 0.806
KRN02810.1
DNA polymerase III subunit delta.
       0.764
KRN02813.1
Hypothetical protein.
       0.752
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.686
KRN02819.1
Cell division membrane protein; Belongs to the SEDS family.
  
    0.681
KRN01192.1
Type II secretory pathway competence component.
  
  
 0.650
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.