STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN02312.1ABC-type oligopeptide transport system, periplasmic component. (547 aa)    
Predicted Functional Partners:
KRN03201.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.897
KRN03200.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.881
KRN03199.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.832
KRN03198.1
ABC-type oligopeptide transport system, ATPase component.
 
 0.797
KRN01399.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
 0.586
KRN01401.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.561
KRN01397.1
ABC-type oligopeptide transport system, periplasmic component.
  
 
0.560
KRN01398.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
 0.545
KRN01400.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.544
KRN02669.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.492
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.