STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN27065.1Sulfur-containing amino acid ABC transporter ATP-binding protein TcyN. (262 aa)    
Predicted Functional Partners:
KRN21202.1
Polar amino acid ABC transporter inner membrane subunit.
 0.982
KRN26110.1
Glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein.
 0.981
KRN24762.1
ABC-type amino acid transport system, permease component.
  0.980
KRN26190.1
Polar amino acid ABC transporter inner membrane subunit.
 0.980
KRN26191.1
Glutamine ABC transporter, permease protein.
 0.980
KRN27062.1
Amino acid ABC transporter permease.
  0.979
KRN27063.1
ABC transporter permease.
  0.979
KRN26107.1
Glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein.
 0.977
KRN19974.1
Polar amino acid ABC transporter inner membrane subunit.
 
  0.951
KRN27064.1
Solute-binding component of ABC transporter.
 
  0.919
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.