STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN21704.1(Fe-S)-binding protein. (389 aa)    
Predicted Functional Partners:
KRN19292.1
methylated-DNA-(protein)-cysteine S-methyltransferase.
      0.913
KRN18557.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.848
KRN19330.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 
 0.827
KRN21703.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.774
KRN21702.1
Fumarate reductase, flavoprotein subunit precursor.
       0.520
KRN20336.1
Phosphotransacetylase.
    
  0.516
queA
S-adenosylmethionine tRNA-ribosyltransferase-isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
   
 0.504
KRN21199.1
Malate dehydrogenase.
    
  0.497
KRN21808.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.454
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.449
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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