STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN21514.1Histidine kinase. (285 aa)    
Predicted Functional Partners:
KRN21513.1
Two-component response regulator.
 
 0.975
KRN26591.1
Signal transduction diguanylate cyclase.
  
 0.957
KRN17604.1
Hypothetical protein.
  
 0.877
KRN15968.1
DNA-binding response regulator, OmpR family (Rec-wHTH domains).
  
 0.868
KRN25692.1
Histidine protein kinase.
 
 
 0.835
KRN16009.1
DNA-binding response regulator.
  
 0.777
KRN18980.1
Response regulator.
  
 0.760
KRN25693.1
Response regulator.
  
 0.752
KRN18232.1
Response regulator.
  
 0.745
KRN16908.1
OmpR family DNA-binding response regulator.
  
 0.735
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.