STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN21138.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
KRN21382.1
Hypothetical protein.
   
 0.771
KRN17768.1
Phage minor structural protein.
  
   0.681
KRN16410.1
Hypothetical protein.
   
   0.660
KRN20018.1
N-acetylmuramoyl-L-alanine amidase.
  
  0.623
KRN17769.1
Phage tail component protein.
   
   0.485
KRN25784.1
LPXTG-motif protein cell wall anchor domain protein.
    
  0.431
KRN25422.1
Hypothetical protein.
    
  0.431
KRN23821.1
Hypothetical protein.
    
  0.431
KRN26521.1
Hypothetical protein.
    
  0.431
KRN21064.1
Hypothetical protein.
    
  0.431
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.