STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN19308.1ABC transporter, ATP-binding protein. (297 aa)    
Predicted Functional Partners:
KRN19307.1
Na+ ABC transporter permease.
  
 0.980
KRN26943.1
Taurine-transporting ATPase.
 
     
0.900
KRN26188.1
ABC-type polar amino acid transport system, ATPase component.
 
     
0.898
KRN18099.1
ABC transporter ATP-binding protein.
 
    
0.897
KRN24761.1
Glutamine ABC transporter, ATP-binding protein.
 
    
0.852
KRN21255.1
ABC transporter family protein.
 
    
0.850
KRN21200.1
Phosphate ABC transporter ATP-binding protein.
 
     
0.840
ecfA-2
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.774
KRN25795.1
Taurine-transporting ATPase.
 
     
0.758
ecfA
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.682
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
Server load: low (22%) [HD]