STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN18444.1Polysaccharide deacetylase. (270 aa)    
Predicted Functional Partners:
KRN24992.1
Hypothetical protein.
  
 
 0.999
KRN18446.1
Family 2 glycosyl transferase.
 
   
 0.921
KRN21720.1
Peptide ABC transporter ATPase.
  
 
 0.702
KRN18445.1
Hypothetical protein.
       0.629
KRN23898.1
Abc transporter, atp-binding protein.
   
 
 0.495
KRN21255.1
ABC transporter family protein.
   
 
 0.495
KRN18904.1
ABC transporter ATPase.
   
 
 0.495
KRN18099.1
ABC transporter ATP-binding protein.
   
 
 0.495
KRN15972.1
ABC transporter ATP-binding protein.
   
 
 0.495
azoR
Hypothetical protein; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
  
   
 0.439
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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