STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN18471.1Isocitrate dehydrogenase. (420 aa)    
Predicted Functional Partners:
KRN23825.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
 0.993
KRN23826.1
Methylcitrate synthase; Belongs to the citrate synthase family.
 
 
 0.971
KRN26382.1
Glutamate synthase (NADPH).
    
 0.957
KRN24977.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.931
KRN26376.1
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family.
 
0.917
argH
Argininosuccinate lyase.
     
 0.901
KRN26040.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.896
KRN24945.1
Aspartate ammonia-lyase.
     
 0.895
KRN25730.1
Cyanide hydratase.
    
  0.879
KRN26383.1
Pyridine nucleotide-disulfide oxidoreductase.
     
 0.843
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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