STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN18480.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
KRN21389.1
Hypothetical protein.
  
     0.596
KRN18479.1
Hypothetical protein.
 
     0.501
KRN26838.1
MerR family transcriptional regulator protein.
  
     0.488
KRN25292.1
Hypothetical protein.
  
     0.481
KRN23837.1
Hypothetical protein.
  
     0.474
KRN26953.1
Hypothetical protein.
  
     0.451
KRN18481.1
Superfamily II DNA RNA helicase.
       0.440
KRN18482.1
Oxidoreductase, NAD-binding domain protein.
       0.412
KRN21064.1
Hypothetical protein.
  
     0.409
KRN18217.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.