STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN17780.1Terminase large subunit. (596 aa)    
Predicted Functional Partners:
KRN17779.1
Portal protein.
 
   
 0.956
KRN17778.1
Peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
     0.930
KRN17781.1
Hypothetical protein.
  
    0.827
KRN17777.1
Prophage L54a, major capsid family protein.
       0.748
KRN20647.1
Hypothetical protein.
     
 0.610
KRN17772.1
Hypothetical protein.
 
     0.570
KRN15512.1
Prophage lp4 protein 7, dna replication.
 
     0.473
KRN17768.1
Phage minor structural protein.
 
     0.450
KRN17770.1
Minor tail protein.
 
     0.447
KRN17776.1
Hypothetical protein.
       0.406
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.