STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN17581.1ABC transporter, substrate-binding protein, family 3. (286 aa)    
Predicted Functional Partners:
KRN26191.1
Glutamine ABC transporter, permease protein.
 0.960
KRN26190.1
Polar amino acid ABC transporter inner membrane subunit.
 0.939
KRN17578.1
Polar amino acid ABC transporter inner membrane subunit.
 
 0.908
KRN17579.1
Arginine ABC transporter, ATP-binding protein ArtM.
 0.900
KRN17577.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 0.875
KRN26009.1
Amino acid abc transporter, substrate binding protein.
 
 
  
 0.851
KRN18098.1
Amino acid ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 
  
 0.737
KRN24761.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.712
KRN26108.1
Phosphonate-transporting ATPase.
 0.688
KRN26111.1
Phosphonate-transporting ATPase.
 0.681
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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