STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN26975.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
KRN26974.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.875
KRN25716.1
Hypothetical protein.
  
     0.699
KRN21143.1
Hypothetical protein.
  
     0.697
KRN19909.1
Hypothetical protein.
  
     0.650
KRN23837.1
Hypothetical protein.
  
     0.635
KRN21196.1
Adhesion exoprotein.
  
     0.605
KRN25712.1
Hypothetical protein.
  
     0.576
KRN21172.1
Hypothetical protein.
  
     0.550
KRN26969.1
Hypothetical protein.
 
     0.529
KRN26970.1
Transcription activator effector-binding protein.
 
   
 0.506
Your Current Organism:
Lactobacillus similis
NCBI taxonomy Id: 1423804
Other names: L. similis DSM 23365 = JCM 2765, Lactobacillus similis DSM 23365, Lactobacillus similis DSM 23365 = JCM 2765, Lactobacillus similis JCM 2765, Lactobacillus similis JCM 2765 = DSM 23365, Lactobacillus sp. JCM 2765
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.