STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN06564.13-hydroxyisobutyrate dehydrogenase. (285 aa)    
Predicted Functional Partners:
KRN07076.1
Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.894
KRN06401.1
Fructose-bisphosphate aldolase.
 
    0.657
KRN06563.1
Hypothetical protein.
       0.645
KRN05530.1
Carboxymuconolactone decarboxylase family protein.
  
 
  0.595
KRN07385.1
Hypothetical protein.
  
 
  0.595
KRN07062.1
FAD FMN-containing dehydrogenase.
    
 0.559
KRN05595.1
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.534
KRN07147.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
 
 0.521
KRN07366.1
Hypothetical protein.
  
 
  0.486
KRN06754.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.482
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
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