STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN07506.1L-cystine-binding protein. (294 aa)    
Predicted Functional Partners:
KRN07507.1
L-cystine permease.
  0.958
KRN07505.1
L-cystine permease.
  0.934
KRN07504.1
L-cystine import ATP-binding protein.
 
  0.879
KRN06696.1
Amino acid ABC transporter permease.
  0.803
KRN06697.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
  0.780
KRN07370.1
ABC transporter, permease protein.
  0.779
KRN06176.1
Polar amino acid ABC transporter permease.
  0.760
KRN06922.1
Amino acid ABC transporter, permease.
  0.739
KRN06896.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
  0.723
KRN07191.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.