STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN06451.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
KRN06452.1
N-acetylglucosamine catabolic protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
 
  
 0.934
KRN06453.1
Intergral membrane protein.
  
    0.828
KRN06450.1
Metallophosphoesterase; Belongs to the 5'-nucleotidase family.
  
    0.783
KRN06449.1
Phosphoesterase.
       0.748
KRN05170.1
Chromosome replication initiation membrane attachment protein.
  
    0.662
KRN06446.1
Adenine-specific DNA methylase.
 
     0.536
KRN05177.1
GTPase YqeH.
  
     0.535
KRN06137.1
Hypothetical protein.
  
     0.529
KRN05156.1
Protein ecsb.
  
     0.521
KRN05219.1
Serine threonine specific protein phosphatase.
   
    0.517
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
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