STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN06312.1UDP-galactopyranose mutase. (379 aa)    
Predicted Functional Partners:
KRN06311.1
Repeat unit transporter.
 
  
 0.912
KRN06998.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.867
KRN07041.1
Udp-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.867
KRN06315.1
Udp-glucose 4-epimerase.
  
 
 0.844
KRN07356.1
Hypothetical protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.820
galT
UDP-glucose--hexose-1-phosphate uridylyltransferase.
     
 0.815
KRN06309.1
Glycosyltransferase.
 
  
 0.782
KRN06804.1
UDP-glucose 6-dehydrogenase.
  
  
 0.776
KRN06813.1
Capsular biosynthesis protein.
 
  
 0.754
KRN06815.1
Oligosaccharide translocase.
 
  
 0.628
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.