STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN05711.1Endolysin. (316 aa)    
Predicted Functional Partners:
KRN07539.1
Hypothetical protein.
 
  
 0.607
KRN07388.1
Hypothetical protein.
   
 0.531
KRN06583.1
Lipoprotein.
  
    0.498
KRN06104.1
Membrane-associated phospholipid phosphatase.
  
     0.473
KRN07514.1
Sensor histidine kinase.
  
   
 0.470
KRN05712.1
Hypothetical protein.
       0.458
KRN05682.1
Hypothetical protein.
  
     0.454
KRN05625.1
Hypothetical protein.
  
     0.437
KRN06963.1
Pyridoxal kinase.
  
     0.423
KRN07244.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.