STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM09752.1Trehalose 6-phosphate phosphorylase. (900 aa)    
Predicted Functional Partners:
KRM09753.1
Beta-phosphoglucomutase.
 
 0.999
KRM09754.1
HAD superfamily hydrolase.
 
     0.839
KRM09572.1
Alpha-glucosidase.
  
 
 0.800
KRM12771.1
Alpha-glucosidase.
  
 
 0.800
KRM12151.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.739
KRM13061.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.739
KRM12615.1
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 31 family.
    
  0.739
KRM13322.1
nagE protein.
  
 
 0.530
KRM13323.1
N-acetylglucosamine PTS, EIICBA.
  
 
 0.530
KRM09750.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.505
Your Current Organism:
Lactobacillus suebicus
NCBI taxonomy Id: 1423807
Other names: L. suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus DSM 5007, Lactobacillus suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus KCTC 3549, Lactobacillus suebicus KCTC 3549 = DSM 5007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.