STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM09542.1Phage head-tail joining protein. (130 aa)    
Predicted Functional Partners:
KRM09543.1
Phage tail protein.
 
     0.950
KRM09544.1
Phage major tail protein.
 
     0.950
KRM09539.1
Phage phi-C31 gp36 major capsid-like protein.
 
     0.909
KRM09537.1
Hypothetical protein.
 
     0.905
KRM09535.1
Phage terminase-like protein, large subunit.
 
     0.904
KRM09538.1
Protease subunit of ATP-dependent Clp protease; Belongs to the peptidase S14 family.
 
     0.902
KRM09546.1
Phage-related tail protein.
 
     0.862
KRM09548.1
Hypothetical protein.
 
     0.823
KRM09549.1
Minor structural protein.
 
     0.800
KRM09362.1
HK97 family phage major capsid protein.
 
     0.799
Your Current Organism:
Lactobacillus suebicus
NCBI taxonomy Id: 1423807
Other names: L. suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus DSM 5007, Lactobacillus suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus KCTC 3549, Lactobacillus suebicus KCTC 3549 = DSM 5007
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