STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM09364.1HK97 family phage portal protein. (397 aa)    
Predicted Functional Partners:
KRM09362.1
HK97 family phage major capsid protein.
 
 
 
 0.981
KRM09367.1
P27 family phage terminase small subunit.
 
    0.966
KRM09363.1
Peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
    0.957
KRM09366.1
Phage terminase.
 
   
 0.954
KRM09359.1
Hypothetical protein.
 
     0.903
KRM09357.1
Hypothetical protein.
 
     0.897
KRM09368.1
Phage endonuclease.
 
  
 0.891
KRM09539.1
Phage phi-C31 gp36 major capsid-like protein.
 
 
 
 0.886
KRM09354.1
Phage tail tape mesure.
 
     0.845
KRM09546.1
Phage-related tail protein.
 
    0.815
Your Current Organism:
Lactobacillus suebicus
NCBI taxonomy Id: 1423807
Other names: L. suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus DSM 5007, Lactobacillus suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus KCTC 3549, Lactobacillus suebicus KCTC 3549 = DSM 5007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.