STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM12837.1Transcriptional regulator. (169 aa)    
Predicted Functional Partners:
KRM12836.1
Major facilitator superfamily permease.
 
     0.943
KRM12835.1
Recombination factor protein RarA.
       0.647
KRM12850.1
Hypothetical protein.
  
     0.553
KRM12832.1
Hypothetical protein.
  
     0.527
KRM12973.1
TetR family transcriptional regulator.
  
     0.515
KRM13139.1
Hypothetical protein.
  
     0.511
KRM12834.1
Hypothetical protein.
       0.471
KRM12838.1
Signal transduction diguanylate cyclase.
       0.466
KRM10754.1
Hypothetical protein.
  
     0.455
KRM09646.1
EmrB QacA subfamily drug resistance transporter; Belongs to the major facilitator superfamily.
 
     0.422
Your Current Organism:
Lactobacillus suebicus
NCBI taxonomy Id: 1423807
Other names: L. suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus DSM 5007, Lactobacillus suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus KCTC 3549, Lactobacillus suebicus KCTC 3549 = DSM 5007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.