STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM12601.1PTS system ascorbate-specific transporter subunit IIC. (454 aa)    
Predicted Functional Partners:
KRM12602.1
Pts, eiib.
 
 
 0.996
KRM09056.1
Hypothetical protein.
 
 
 0.978
KRM12603.1
Hypothetical protein.
 
 
 0.965
KRM09799.1
Phosphocarrier protein HPr.
    
 0.895
KRM12604.1
Hypothetical protein.
 
     0.872
KRM11983.1
Hypothetical protein.
   
    0.713
KRM11984.1
Pyridine nucleotide-disulfide oxidoreductase family protein.
   
    0.713
rpmE2
50S ribosomal protein L31 type B.
   
    0.642
KRM12294.1
Riboflavin synthase subunit alpha.
   
    0.642
KRM13322.1
nagE protein.
  
  
 0.597
Your Current Organism:
Lactobacillus suebicus
NCBI taxonomy Id: 1423807
Other names: L. suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus DSM 5007, Lactobacillus suebicus DSM 5007 = KCTC 3549, Lactobacillus suebicus KCTC 3549, Lactobacillus suebicus KCTC 3549 = DSM 5007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.