STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00755.1Permease. (378 aa)    
Predicted Functional Partners:
KRN00756.1
Oxalyl-coa decarboxylase; Belongs to the TPP enzyme family.
 
    0.779
frc
Formyl-coenzyme a transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
 
  
 0.608
KRN00287.1
Adhesion exoprotein.
 
     0.595
KRN00754.1
Hypothetical protein.
       0.580
KRN00769.1
Transcriptional regulator, xre family.
  
     0.564
KRN00477.1
Transcriptional regulator.
  
     0.508
KRM99477.1
Immunity protein PlnI.
  
     0.492
KRN00771.1
Transcriptional regulator.
  
     0.437
KRM98013.1
Hypothetical protein.
  
     0.435
KRN00753.1
Hypothetical protein.
       0.429
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.