STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM97881.1Cytidine deaminase. (131 aa)    
Predicted Functional Partners:
udk
Uridine kinase.
    
 0.953
tdk
Thymidine kinase.
    
 0.951
KRM98072.1
Hypothetical protein; Belongs to the 5'-nucleotidase family.
    
 0.940
KRM97882.1
Hypothetical protein.
 
  
  0.912
KRN00543.1
Deoxyguanosine kinase.
    
 0.844
KRN00544.1
Deoxyadenosine kinase.
    
 0.844
KRM97879.1
Hydrolase, alpha beta fold family protein.
 
 
  0.817
KRM97888.1
Pnp Udp family phosphorylase.
  
 
 0.794
KRM97889.1
Uridine phosphorylase.
  
 
 0.794
KRM97878.1
Hypothetical protein.
    
  0.784
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.