Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM98027.1 | KRM98028.1 | FD18_GL000980 | FD18_GL000981 | Hypothetical protein. | Aldose epimerase family protein. | 0.714 |
| KRM98027.1 | KRM98030.1 | FD18_GL000980 | FD18_GL000983 | Hypothetical protein. | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.633 |
| KRM98027.1 | hslU | FD18_GL000980 | FD18_GL000982 | Hypothetical protein. | Atp-dependent protease atp-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.669 |
| KRM98027.1 | topA | FD18_GL000980 | FD18_GL000986 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.467 |
| KRM98027.1 | trmFO | FD18_GL000980 | FD18_GL000985 | Hypothetical protein. | tRNA M(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.638 |
| KRM98027.1 | xerC | FD18_GL000980 | FD18_GL000984 | Hypothetical protein. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.633 |
| KRM98028.1 | KRM98027.1 | FD18_GL000981 | FD18_GL000980 | Aldose epimerase family protein. | Hypothetical protein. | 0.714 |
| KRM98028.1 | KRM98030.1 | FD18_GL000981 | FD18_GL000983 | Aldose epimerase family protein. | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.721 |
| KRM98028.1 | KRM98034.1 | FD18_GL000981 | FD18_GL000987 | Aldose epimerase family protein. | Rossmann fold nucleotide-binding protein for DNA uptake. | 0.428 |
| KRM98028.1 | hslU | FD18_GL000981 | FD18_GL000982 | Aldose epimerase family protein. | Atp-dependent protease atp-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.726 |
| KRM98028.1 | topA | FD18_GL000981 | FD18_GL000986 | Aldose epimerase family protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.562 |
| KRM98028.1 | trmFO | FD18_GL000981 | FD18_GL000985 | Aldose epimerase family protein. | tRNA M(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.714 |
| KRM98028.1 | xerC | FD18_GL000981 | FD18_GL000984 | Aldose epimerase family protein. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.726 |
| KRM98030.1 | KRM98027.1 | FD18_GL000983 | FD18_GL000980 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Hypothetical protein. | 0.633 |
| KRM98030.1 | KRM98028.1 | FD18_GL000983 | FD18_GL000981 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Aldose epimerase family protein. | 0.721 |
| KRM98030.1 | KRM98034.1 | FD18_GL000983 | FD18_GL000987 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Rossmann fold nucleotide-binding protein for DNA uptake. | 0.627 |
| KRM98030.1 | KRM98036.1 | FD18_GL000983 | FD18_GL000989 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.488 |
| KRM98030.1 | hslU | FD18_GL000983 | FD18_GL000982 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Atp-dependent protease atp-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.999 |
| KRM98030.1 | rnhB | FD18_GL000983 | FD18_GL000988 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Ribonuclease hii; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.429 |
| KRM98030.1 | topA | FD18_GL000983 | FD18_GL000986 | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.754 |
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