STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM98115.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
KRM98116.1
Polymerization and export protein.
 
   
 0.724
KRM98120.1
Hypothetical protein.
 
    0.705
KRM98121.1
Glycosyltransferase.
 
    0.668
KRM98118.1
Udp-galactopyranose mutase.
       0.658
KRM98117.1
Hypothetical protein.
  
    0.652
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
    
 0.648
KRM98119.1
Polysaccharide polymerase.
       0.628
KRM98122.1
Hypothetical protein.
  
    0.613
KRN00647.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.422
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.