STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM98243.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
KRM98245.1
Hypothetical protein.
       0.794
KRM98246.1
Hypothetical protein.
       0.786
KRM98238.1
Lysin.
       0.775
KRM98239.1
Holin.
       0.773
KRM98240.1
Hypothetical protein.
       0.773
KRM98241.1
Hypothetical protein.
       0.773
KRM98242.1
Hypothetical protein.
       0.773
KRM98244.1
Hypothetical protein.
       0.773
KRM98247.1
Phage tail tape measure protein.
       0.630
KRM98248.1
Hypothetical protein.
       0.611
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.