STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00254.1Hypothetical protein. (728 aa)    
Predicted Functional Partners:
KRN00253.1
Bacteriocin ABC transporter.
    
  0.863
KRN00255.1
Hypothetical protein.
       0.791
KRN00252.1
Transcriptional regulator.
       0.524
KRN00251.1
Hypothetical protein.
       0.514
KRN00250.1
Hypothetical protein.
       0.489
KRN00256.1
Hypothetical protein.
       0.482
KRN00448.1
Cell division ATP-binding protein FtsE.
    
  0.420
KRN00555.1
ABC superfamily ATP binding cassette transporter, ABC protein.
    
  0.406
KRM97843.1
Peptide ABC transporter ATPase.
    
  0.405
KRM99992.1
ABC transporter ATPase component.
    
  0.405
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.