STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00054.1ABC transporter ATPase component. (225 aa)    
Predicted Functional Partners:
KRN00055.1
ABC transporter permease component.
 
 0.997
KRN00056.1
Transcriptional regulator, tetr family.
 
 
   0.931
KRM97987.1
Hypothetical protein.
  
 0.923
KRM99991.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.923
ecfA-2
Cobalt import ATP-binding protein CbiO 1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.918
KRN00555.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
0.909
KRN00838.1
Oligopeptide ABC transporter permease.
 
 
 
  0.860
KRN00438.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 
  0.801
KRM99159.1
Lactacin F transporter auxillary protein.
  
 0.744
KRM99145.1
Abc-type amino acid transport.
 
 
 0.734
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.