STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00074.1Helix-turn-helix domain protein. (264 aa)    
Predicted Functional Partners:
KRM98617.1
Hypothetical protein.
  
     0.709
KRN00875.1
Membrane protein involved in colicin uptake.
  
    0.698
KRM98694.1
Hypothetical protein.
  
  
  0.689
KRN00475.1
Major facilitator superfamily permease.
 
     0.682
KRN00852.1
Hypothetical protein.
  
     0.676
KRN00075.1
ABC transporter.
 
     0.649
KRM98695.1
Hypothetical protein.
  
  
  0.622
KRM99651.1
Hypothetical protein.
  
  
  0.594
KRM98082.1
Integrase-recombinase; Belongs to the 'phage' integrase family.
  
    0.577
KRM98043.1
Rna polymerase sigma factor rpod.
  
    0.563
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.