STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM99853.1Histidine kinase. (486 aa)    
Predicted Functional Partners:
KRM99854.1
DNA-binding response regulator.
 0.997
KRM99106.1
DNA-binding response regulator.
 0.987
KRM97999.1
Response regulator.
 0.980
KRN00034.1
Two-component system response regulator.
 0.978
KRN00373.1
DNA-binding response regulator.
 0.974
KRM98230.1
Two-component system response regulator.
 0.973
KRM98334.1
Hypothetical protein.
  
 0.910
KRM98069.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.844
KRM99855.1
Metal-binding protein, inactivated metal-binding site.
 
     0.662
KRN00033.1
Two-component system histidine kinase.
 
0.649
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.