STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00599.1Hypothetical protein. (1234 aa)    
Predicted Functional Partners:
KRM98617.1
Hypothetical protein.
 
 0.999
KRM98037.1
Dna protecting protein; Belongs to the peptidase S41A family.
 
  0.931
KRN00759.1
Hypothetical protein.
  
  0.909
KRN00760.1
Hypothetical protein.
  
  0.909
KRN00245.1
Cell wall-associated serine proteinase.
  
 0.907
KRN00427.1
RNA polymerase sigma factor, sigma-70 family.
  
 
 0.851
KRN00287.1
Adhesion exoprotein.
  
  
 0.849
KRM98406.1
Hypothetical protein.
    
 0.848
KRM98410.1
Cell-wall-anchored protein (lpxtg motif).
    
 0.848
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.843
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.