STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00622.1Transcriptional regulator. (190 aa)    
Predicted Functional Partners:
KRN00623.1
Hypothetical protein.
 
  
 0.855
KRN00621.1
Hypothetical protein.
 
     0.637
KRM98317.1
Hypothetical protein.
  
     0.613
KRM99115.1
GtcA family membrane protein.
  
  
 0.584
KRN00626.1
ABC superfamily ATP binding cassette transporter permease subunit.
 
     0.522
KRM99078.1
Hypothetical protein.
  
     0.510
KRN00391.1
Hypothetical protein.
  
     0.487
KRM98198.1
Hypothetical protein.
  
     0.468
KRM99824.1
Hypothetical protein.
  
     0.450
KRN00353.1
Membrane-associated phospholipid phosphatase.
  
     0.449
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.