STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00626.1ABC superfamily ATP binding cassette transporter permease subunit. (337 aa)    
Predicted Functional Partners:
KRN00621.1
Hypothetical protein.
 
     0.776
KRM98143.1
TPR repeat-containing protein.
  
     0.774
KRN00791.1
Hypothetical protein.
  
     0.772
KRM97823.1
Hypothetical protein.
  
     0.772
KRM98317.1
Hypothetical protein.
  
     0.772
KRN00867.1
Hypothetical protein.
  
     0.768
KRM99475.1
Transcriptional regulator.
  
     0.768
KRN00812.1
Hypothetical protein.
  
     0.765
KRN00044.1
Membrane ancor connecting MutS2 with cell-division Z-ring.
  
     0.765
KRM97818.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.