STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN00553.1Cytochrome D ubiquinol oxidase subunit II. (340 aa)    
Predicted Functional Partners:
KRN00554.1
Cytochrome D ubiquinol oxidase subunit I.
 0.999
KRN00552.1
ABC superfamily ATP binding cassette transporter, ABC membrane protein.
 
  
 0.989
KRN00551.1
ABC superfamily ATP binding cassette transporter, ABC membrane protein.
 
  
 0.984
KRN00284.1
Fumarate reductase flavoprotein subunit.
    
 0.881
KRN00550.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
     0.824
KRM97828.1
Fumarate reductase.
     
 0.762
KRM99723.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 
 0.741
KRN00362.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.677
KRN00627.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Belongs to the aldehyde dehydrogenase family.
   
 
 0.585
KRN00756.1
Oxalyl-coa decarboxylase; Belongs to the TPP enzyme family.
   
 
  0.568
Your Current Organism:
Lactobacillus taiwanensis
NCBI taxonomy Id: 1423809
Other names: L. taiwanensis DSM 21401, Lactobacillus taiwanensis DSM 21401
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