STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87827.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
KRM87762.1
Hypothetical protein.
 
     0.667
KRM88282.1
Hypothetical protein.
 
     0.645
KRM87972.1
ABC transporter permease.
  
     0.640
KRM87327.1
Hypothetical protein.
  
     0.610
KRM87826.1
Membrane protein.
       0.584
KRM88097.1
Hypothetical protein.
  
     0.551
KRM86853.1
Integral inner membrane protein.
 
     0.489
KRM87662.1
Hypothetical protein.
  
    0.477
KRM88424.1
Transcriptional regulator.
  
     0.468
KRM87613.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.