STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87539.1Sugar isomerase. (329 aa)    
Predicted Functional Partners:
KRM87538.1
Transcriptional regulator.
 
    0.814
KRM87535.1
Mannose-specific PTS system component IIC.
 
    0.694
KRM87537.1
Hypothetical protein.
 
  
 0.694
KRM87534.1
PTS system, mannose-specific IID component.
 
    0.677
KRM87540.1
Hypothetical protein.
 
  
 0.640
KRM87536.1
PTS system sorbose subfamily IIB component.
 
    0.626
KRM86432.1
PTS system sucrose-specific transporter subunit IIABC.
 
 
 0.593
KRM87190.1
Pts system, mannose-specific iiab component.
  
  
 0.552
KRM87526.1
PTS system iic component.
 
    0.549
KRM87487.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.531
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.