STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87619.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
KRM87886.1
TetR family transcriptional regulator.
  
     0.725
KRM87615.1
protein-N(pi)-phosphohistidine--sugar phosphotransferase.
 
   
 0.678
KRM87618.1
DhaKLM operon coactivator DhaQ.
 
     0.665
KRM86575.1
Hypothetical protein.
  
     0.532
KRM87616.1
Dihydroxyacetone kinase, phosphatase domain dak2.
 
     0.513
KRM87444.1
Hypothetical protein.
  
     0.497
KRM87242.1
Amino acid export protein.
  
     0.460
KRM87587.1
Hypothetical protein.
  
     0.458
KRM86615.1
Hypothetical protein.
  
     0.452
KRM87617.1
Dihydroxyacetone kinase subunit DhaK.
       0.439
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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