STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87668.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
KRM87405.1
Hypothetical protein.
 
  0.833
KRM87129.1
Hypothetical protein.
 
 
  0.833
KRM87888.1
Signal transduction diguanylate cyclase.
 
  0.828
KRM87409.1
Signal transduction diguanylate cyclase.
 
  0.826
KRM86499.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
  0.826
KRM87400.1
Hypothetical protein.
 
0.824
KRM87211.1
Signal transduction diguanylate cyclase.
 
 
 0.824
KRM87593.1
Hypothetical protein.
  
     0.657
KRM87411.1
Signal transduction diguanylate cyclase.
 
 
 
0.514
KRM87669.1
Hypothetical protein.
 
    
0.512
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.