STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87250.1Branched-chain amino acid ABC transporter ATPase. (234 aa)    
Predicted Functional Partners:
KRM87248.1
Amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KRM87247.1
Branched-chain amino acid abc transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
KRM87249.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 
0.998
KRM87246.1
livA protein.
 
 
 0.997
KRM86536.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
   
 
0.647
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
  0.539
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.452
KRM87484.1
Peptide ABC transporter ATPase.
 
     
0.452
KRM86719.1
Hypothetical protein.
    
  0.449
KRM86828.1
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
   
  0.439
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.