STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM86756.1Metal-dependent hydrolase of the TIM-barrel fold protein. (388 aa)    
Predicted Functional Partners:
KRM86757.1
Glutamine synthetase.
     0.979
KRM86755.1
Amino acid permease.
 
     0.929
KRM88271.1
Glutamine synthetase.
      0.904
KRM86719.1
Hypothetical protein.
  
 
 0.510
KRM86964.1
Alcohol dehydrogenase.
  
 
  0.459
KRM86965.1
Threonine dehydrogenase related Zn-dependent dehydrogenase.
  
 
  0.459
KRM86828.1
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.458
KRM87368.1
Short-chain dehydrogenase oxidoreductase.
 
 
 0.447
KRM86780.1
Glycosyltransferase.
  
    0.401
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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