STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM86630.1Malolactic fermentation system transcription activator; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
KRM86631.1
Malate dehydrogenase.
 
   
 0.817
KRM87504.1
Lysr family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.741
KRM86632.1
Malate permease.
 
   
 0.622
KRM86571.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.543
KRM88081.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.499
KRM86627.1
Auxin efflux carrier (AEC) family permease.
     
 0.489
KRM86628.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.439
KRM86629.1
Hypothetical protein.
       0.439
Your Current Organism:
Lactobacillus thailandensis
NCBI taxonomy Id: 1423810
Other names: L. thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis DSM 22698, Lactobacillus thailandensis DSM 22698 = JCM 13996, Lactobacillus thailandensis JCM 13996, Lactobacillus thailandensis JCM 13996 = DSM 22698
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