STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK65784.1Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (331 aa)    
Predicted Functional Partners:
KRK63704.1
Hypothetical protein.
  
     0.579
KRK65785.1
LacI family transcriptional regulator.
  
    0.541
KRK64733.1
Extracellular protein.
  
     0.510
KRK65381.1
Putative teichoic acid glycosylation protein (putative).
  
     0.442
KRK65465.1
Glycopeptide antibiotics resistance protein.
  
     0.434
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.431
KRK64439.1
Integral membrane protein.
 
     0.425
KRK64254.1
Hypothetical protein.
  
     0.405
KRK65783.1
Hypothetical protein.
       0.400
Your Current Organism:
Lactobacillus tucceti
NCBI taxonomy Id: 1423811
Other names: L. tucceti DSM 20183, Lactobacillus tucceti DSM 20183
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