Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRK64129.1 | KRK64426.1 | FC72_GL000695 | FC72_GL000447 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III subunit delta. | 0.993 |
| KRK64129.1 | KRK64427.1 | FC72_GL000695 | FC72_GL000448 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.791 |
| KRK64129.1 | dnaA | FC72_GL000695 | FC72_GL000694 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.998 |
| KRK64129.1 | dnaX | FC72_GL000695 | FC72_GL000440 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.994 |
| KRK64425.1 | KRK64426.1 | FC72_GL000446 | FC72_GL000447 | Aminotransferase class iv. | DNA polymerase III subunit delta. | 0.864 |
| KRK64425.1 | KRK64427.1 | FC72_GL000446 | FC72_GL000448 | Aminotransferase class iv. | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.851 |
| KRK64425.1 | KRK64429.1 | FC72_GL000446 | FC72_GL000450 | Aminotransferase class iv. | acyl-ACP thioesterase. | 0.619 |
| KRK64425.1 | dnaX | FC72_GL000446 | FC72_GL000440 | Aminotransferase class iv. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.635 |
| KRK64425.1 | rsmI | FC72_GL000446 | FC72_GL000449 | Aminotransferase class iv. | uroporphyrin-III C tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.720 |
| KRK64425.1 | tmk | FC72_GL000446 | FC72_GL000445 | Aminotransferase class iv. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.879 |
| KRK64426.1 | KRK64129.1 | FC72_GL000447 | FC72_GL000695 | DNA polymerase III subunit delta. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.993 |
| KRK64426.1 | KRK64425.1 | FC72_GL000447 | FC72_GL000446 | DNA polymerase III subunit delta. | Aminotransferase class iv. | 0.864 |
| KRK64426.1 | KRK64427.1 | FC72_GL000447 | FC72_GL000448 | DNA polymerase III subunit delta. | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.881 |
| KRK64426.1 | KRK64429.1 | FC72_GL000447 | FC72_GL000450 | DNA polymerase III subunit delta. | acyl-ACP thioesterase. | 0.619 |
| KRK64426.1 | dnaX | FC72_GL000447 | FC72_GL000440 | DNA polymerase III subunit delta. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.975 |
| KRK64426.1 | rsmI | FC72_GL000447 | FC72_GL000449 | DNA polymerase III subunit delta. | uroporphyrin-III C tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.825 |
| KRK64426.1 | tmk | FC72_GL000447 | FC72_GL000445 | DNA polymerase III subunit delta. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.945 |
| KRK64427.1 | KRK64129.1 | FC72_GL000448 | FC72_GL000695 | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.791 |
| KRK64427.1 | KRK64425.1 | FC72_GL000448 | FC72_GL000446 | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Aminotransferase class iv. | 0.851 |
| KRK64427.1 | KRK64426.1 | FC72_GL000448 | FC72_GL000447 | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | DNA polymerase III subunit delta. | 0.881 |
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