KRK65504.1 protein (Lactobacillus tucceti) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

KRK65504.1

ABC transporter, ATP-binding protein. (632 aa)

Predicted Functional Partners:

rplU

0.784

rpsO

0.781

rpsC

0.780

thyA

0.779

rplC

0.775

rpmH

0.772

rpmD

0.771

rplP

0.771

rpsS

0.771

rpmF

0.771

Your Current Organism:

Lactobacillus tucceti

NCBI taxonomy Id: 1423811
Other names: L. tucceti DSM 20183, Lactobacillus tucceti DSM 20183

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRK65504.1	rplC	FC72_GL000974	FC72_GL000656	ABC transporter, ATP-binding protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.775
KRK65504.1	rplP	FC72_GL000974	FC72_GL000649	ABC transporter, ATP-binding protein.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.771
KRK65504.1	rplU	FC72_GL000974	FC72_GL000073	ABC transporter, ATP-binding protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.784
KRK65504.1	rpmD	FC72_GL000974	FC72_GL000639	ABC transporter, ATP-binding protein.	Hypothetical protein.	0.771
KRK65504.1	rpmF	FC72_GL000974	FC72_GL000945	ABC transporter, ATP-binding protein.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family.	0.771
KRK65504.1	rpmH	FC72_GL000974	FC72_GL000693	ABC transporter, ATP-binding protein.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.772
KRK65504.1	rpsC	FC72_GL000974	FC72_GL000650	ABC transporter, ATP-binding protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.780
KRK65504.1	rpsO	FC72_GL000974	FC72_GL000888	ABC transporter, ATP-binding protein.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.781
KRK65504.1	rpsS	FC72_GL000974	FC72_GL000652	ABC transporter, ATP-binding protein.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.771
KRK65504.1	thyA	FC72_GL000974	FC72_GL000975	ABC transporter, ATP-binding protein.	Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.	0.779
rplC	KRK65504.1	FC72_GL000656	FC72_GL000974	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter, ATP-binding protein.	0.775
rplC	rplP	FC72_GL000656	FC72_GL000649	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplU	FC72_GL000656	FC72_GL000073	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplC	rpmD	FC72_GL000656	FC72_GL000639	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein.	0.999
rplC	rpmF	FC72_GL000656	FC72_GL000945	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplC	rpmH	FC72_GL000656	FC72_GL000693	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.999
rplC	rpsC	FC72_GL000656	FC72_GL000650	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsO	FC72_GL000656	FC72_GL000888	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rplC	rpsS	FC72_GL000656	FC72_GL000652	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplP	KRK65504.1	FC72_GL000649	FC72_GL000974	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	ABC transporter, ATP-binding protein.	0.771